Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789259.1_cds_XP_016495481.1_918
CDS Infomation

[gene=LOC107814549] [db_xref=GeneID:107814549] [protein=probable galacturonosyltransferase 6 isoform X2] [protein_id=XP_016495481.1] [location=join(6018..6135,6234..6268,7122..7163,7261..7399,7507..7580,8497..8729,9372..9729,10405..10920,11397..11672)] [gbkey=CDS]
Sequence

ATGAGGCTTTTTCGGAAATGTACGAGGATATTTATAATCCTCTGTTTGTTTGCTGTTTCT
GTTACCACTCCAATTTTATTGCTTTCTTCACATAGGCTTAGACATCTTGGTTCTGATGGG
TCGAAGGAGTTTGTTGGAGATTTATCAATTATTAAGCAAAGGTTAGAGGTTCGGGCACTT
AATGCAGTTCAACAGGAAGAAGGTCGAAGTGTCAAAGAACCGATCTTGGATGTCTACCGA
GATGGCGACCAAAGTTCTGCAGTCAGTTTAGATTCTATTGATAAGAATGATAGTGTTGGC
AAACCTGAGAATGCCAGCTTGTCGGGAAATGACGTAACCACACATGCTCCGAAGAAAGAA
AGTCAACAAAGTCTACCAGAGCAAAAAGTGGCCACAACTAGAGAAAAGGAAAAATCCAGG
CCAGAAGAGGTTCAACGTGGTCAGAATGTACAATCCCATCCACGGAGAGCATTAGATGAG
AAGGTAAAGGAGGTTAAAGATCAGCTGATTAGGGCCAAAGCATTCTTGAATTTTGTACCA
CCGGGTAGTAGCTCTAATTTTGTGAAAGAGATAAAGCTACGAATTAAAGACTTGGAACGA
GCTGTTGGTGAAGCTACTAAAGATTCTGATCTGTCAAGGAGGGCGATACAGAAGATGAAA
GCCATGGATTCAACCCTGTTGAAAGCCAGTAAACTCTTTCCTGAATGCTCAGCAATGGTG
AAGAAACTTCGTGCAATGACATATAACGCTGAGGAACAGCTTCGATCGCAAAAGAATCAA
GCTTCCTTCCTTGTAAATCTTGCTGGACGAACTACCCCGAAAGGCCTTCATTGCCTCTCC
ATGAGGTTGACCACTGAATACTTTTCTCTACCGCCTGAGGAGCAGGAACTGCCTGACCAA
CATAAATTTCAGGATCCAGATCTGTATCACTTTGCTGTTTTCTCTGACAATGTTTTGGCA
TGTTCTGCGGTTGTCAACTCAACTGTATCAACTGCTAGGGTTCCAGAGAAGATTGTGTTT
CATATAGTGACAGATTCTCTTAACCTACCAGCCATGACAATGTGGTTCTTGTCGAATCCT
CCTGGCAAAGTAACAATTCAGATCCAAAGCATAGACAAGTTTGATTGGTTATCAAACAAG
TATATTCTGCAGAAGCAAGAGTCTCTTGATCCAAGATACACTTCCCCCCTGAACCACCTG
CGTTTTTATCTGCCTGATATATTTCCATCTCTCAACAAGATAGTGCTCCTTGACCATGAC
GTGGTTGTGAAAAGGGATCTAACCGGACTTTGGCGGATCAACATGAAGGGTAAAGTGAAT
GGTGCAGTGGAGACCTGTCTGGAAGGCGAGCCTACATTCCGCCGAATGGATATGTTCATC
AATTTTACCGACCCCCTGGTGGCAAAGAGGTTTGATGTGAAATCATGCACTTGGGCATTC
GGGATGAATATATTTGATCTGCAGGAATGGAGGAAACGAAACCTAACTGCGCTCTATCAC
AAGTACTTGGAGCTGGGAAGTGATAGACCATTAATGAAAGCTGGTACTTTGCCAATCGGT
TGGATGACCTTTTACAAACATACACGTGCTATAGATCGGAGATGGCATGTCTTGGGATTG
GGGTACGAATCTGGTGTCAGACTTAACGAGATCGAGCAGGCAGCTGTGATTCATTATGAT
GGAGTTATGAAACCATGGCTAGAGATTGGACTTCAGAAGTTCAAGCCCTATTGGAAGAAA
CACGTTTGGTACGAACATCCTTATCTTCAACAGTGCAATATACATGAATAG

Peptide Sequence

PEP ID

XP_016495481.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 6 isoform X2 [Nicotiana tabacum]
Sequence

MRLFRKCTRIFIILCLFAVSVTTPILLLSSHRLRHLGSDGSKEFVGDLSIIKQRLEVRAL
NAVQQEEGRSVKEPILDVYRDGDQSSAVSLDSIDKNDSVGKPENASLSGNDVTTHAPKKE
SQQSLPEQKVATTREKEKSRPEEVQRGQNVQSHPRRALDEKVKEVKDQLIRAKAFLNFVP
PGSSSNFVKEIKLRIKDLERAVGEATKDSDLSRRAIQKMKAMDSTLLKASKLFPECSAMV
KKLRAMTYNAEEQLRSQKNQASFLVNLAGRTTPKGLHCLSMRLTTEYFSLPPEEQELPDQ
HKFQDPDLYHFAVFSDNVLACSAVVNSTVSTARVPEKIVFHIVTDSLNLPAMTMWFLSNP
PGKVTIQIQSIDKFDWLSNKYILQKQESLDPRYTSPLNHLRFYLPDIFPSLNKIVLLDHD
VVVKRDLTGLWRINMKGKVNGAVETCLEGEPTFRRMDMFINFTDPLVAKRFDVKSCTWAF
GMNIFDLQEWRKRNLTALYHKYLELGSDRPLMKAGTLPIGWMTFYKHTRAIDRRWHVLGL
GYESGVRLNEIEQAAVIHYDGVMKPWLEIGLQKFKPYWKKHVWYEHPYLQQCNIHE

Transcript Sequence

Gene sequence data has not been registered.